STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3472PFAM: glycoside hydrolase family 3 domain protein; KEGG: rpc:RPC_1611 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 3 family. (771 aa)    
Predicted Functional Partners:
Celf_0317
PFAM: glycosyltransferase 36; glycosyltransferase 36 associated; carbohydrate binding; KEGG: glycosyltransferase 36.
    
 0.908
cbhA
1, 4-beta cellobiohydrolase; This enzyme hydrolyzes 1,4-beta-D-glucosidic linkages of cellulose. Weak activity against carboxymethylcellulose, bacterial microcrystalline cellulose and barley beta-glucan. Has also weak endoglucanase activity. Hydrolyzes glucosidic bonds with inversion of anomeric configuration; Belongs to the glycosyl hydrolase 6 (cellulase B) family.
 
   
  0.900
Celf_3473
PFAM: major facilitator superfamily MFS_1; KEGG: aau:AAur_pTC20156 putative sugar transporter.
     
 0.782
Celf_0468
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sna:Snas_2625 glycoside hydrolase family 3 domain-containing protein; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.750
Celf_2053
KEGG: rmr:Rmar_2069 glycoside hydrolase family 3 domain protein; PFAM: glycoside hydrolase family 3 domain protein; SMART: PA14 domain protein.
  
  
 
0.750
Celf_2791
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bcv:Bcav_1318 beta-glucosidase.
  
  
 
0.750
Celf_0583
PFAM: glycoside hydrolase family 3 domain protein; coagulation factor 5/8 type domain protein; Na-Ca exchanger/integrin-beta4; KEGG: stp:Strop_2444 glycoside hydrolase family 3 protein.
  
  
 
0.742
Celf_3372
PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-glucosidase-like glycosyl hydrolase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.740
Celf_0140
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sgr:SGR_3126 putative beta-glucosidase.
  
  
 
0.712
Celf_1924
KEGG: ami:Amir_3216 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein.
   
 0.689
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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