STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3492KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (511 aa)    
Predicted Functional Partners:
Celf_3493
PFAM: inner-membrane translocator; KEGG: multiple monosaccharide ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.959
Celf_2747
PFAM: inner-membrane translocator; KEGG: kra:Krad_3727 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.929
Celf_2608
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 
0.901
Celf_0890
PFAM: inner-membrane translocator; KEGG: xce:Xcel_0422 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.887
Celf_3491
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ABC-type xylose transport system, periplasmic component.
  
 0.882
Celf_0889
PFAM: inner-membrane translocator; KEGG: xce:Xcel_0421 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.829
Celf_2986
PFAM: inner-membrane translocator; KEGG: mlb:MLBr_00397 putative transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.825
Celf_2607
PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.824
Celf_2609
KEGG: putative sugar ABC transporter, substrate-binding protein.
  
 0.815
Celf_1783
KEGG: multiple monosaccharide-binding protein.
  
 0.757
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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