Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB46476.1KEGG: cdf:CD0651 hypothetical protein. (395 aa)    
Predicted Functional Partners:
ADB46475.1
TIGRFAM: peptidase T-like protein; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: sth:STH1689 peptidase.
       0.707
ADB47958.1
KEGG: cno:NT01CX_1202 hypothetical protein.
  
   
 0.601
ADB47959.1
KEGG: ctc:CTC00669 hypothetical protein.
  
     0.569
ADB47622.1
KEGG: dvl:Dvul_2938 hypothetical protein.
  
     0.508
ADB48350.1
KEGG: bcl:ABC0392 hypothetical protein.
  
     0.491
ADB46477.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ere:EUBREC_1207 phosphoglycerate dehydrogenase, putative.
       0.465
ADB46786.1
PFAM: Haemagluttinin domain protein; Hep_Hag repeat- containing protein; YadA domain protein; S-layer domain protein; KEGG: pmu:PM0714 Hsf.
  
     0.454
ADB46478.1
KEGG: see:SNSL254_A4535 hypothetical protein.
 
     0.412
ADB48386.1
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: amt:Amet_0676 gamma-glutamyltransferase.
 
     0.401
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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