Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADB46494.1PFAM: ABC-3 protein; KEGG: cbl:CLK_0805 manganese/zinc/iron chelate ABC transporter permease. (270 aa)    
Predicted Functional Partners:
ADB46495.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbf:CLI_1460 manganese/zinc/iron chelate ABC transporter ATP-binding protein.
 
 0.999
ADB46496.1
PFAM: periplasmic solute binding protein; KEGG: ckr:CKR_2696 hypothetical protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.995
ADB46493.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: cth:Cthe_0546 ferric uptake regulator family protein; Belongs to the Fur family.
 
  
 0.915
ADB47044.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_0505 glutamine ABC transporter, permease protein.
   
 
 0.506
ADB48032.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dfe:Dfer_4049 ABC transporter related.
     
 0.426
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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