Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB46557.1TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: gka:GK1526 hypothetical protein. (356 aa)    
Predicted Functional Partners:
ADB48013.1
Hypothetical protein.
  
     0.678
ADB48050.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hypothetical protein.
  
     0.617
ADB48033.1
PFAM: OstA family protein; KEGG: lba:Lebu_2045 OstA family protein.
  
     0.614
ADB48078.1
PFAM: sulfatase; KEGG: emi:Emin_0565 sulfatase.
  
     0.612
ADB48053.1
PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein.
  
     0.605
ADB46416.1
PFAM: protein of unknown function DUF721; KEGG: cef:CE0005 hypothetical protein.
  
     0.601
ADB48215.1
KEGG: cpi:Cpin_2966 hypothetical protein.
  
     0.583
ADB46559.1
PFAM: KWG Leptospira repeat protein; KEGG: ate:Athe_0718 KWG Leptospira repeat protein.
 
     0.572
ADB46558.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator.
       0.528
ADB47694.1
KEGG: ctc:CTC00686 ATP-dependent nuclease subunit B.
  
     0.504
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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