Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB46579.1PFAM: aminotransferase class V; KEGG: aoe:Clos_2343 aminotransferase class V. (428 aa)    
Predicted Functional Partners:
ADB46856.1
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: cac:CAC3292 NifU homolog involved in Fe-S cluster formation.
  
 
 0.952
ADB46854.1
PFAM: SufBD protein; KEGG: cbe:Cbei_1850 FeS assembly protein SufD.
 
 
 0.811
ADB46852.1
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: ckr:CKR_0744 hypothetical protein.
 
  
 0.798
ADB46853.1
TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: cac:CAC3289 iron-regulated ABC-type transporter membrane component (SufB).
 
 
 0.752
ADB46578.1
PFAM: Endoribonuclease L-PSP; KEGG: pde:Pden_3421 endoribonuclease L-PSP.
  
    0.748
ADB46580.1
PFAM: aminotransferase class I and II; KEGG: fnu:FN0605 aspartate aminotransferase.
  
  
 0.694
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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