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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB46584.1PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: dze:Dd1591_3247 alpha/beta hydrolase fold-3 domain protein. (327 aa)    
Predicted Functional Partners:
ADB48306.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: cbt:CLH_1645 pyridine nucleotide-disulphide oxidoreductase family protein.
  
 
 0.966
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.762
ADB46585.1
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mjl:Mjls_0759 extradiol ring-cleavage dioxygenase III subunit B.
       0.741
ADB46892.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cby:CLM_3126 pyruvate ferredoxin oxidoreductase.
  
   0.698
rnfB
Fe-S cluster domain protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
   0.571
ADB46586.1
PFAM: Aldehyde Dehydrogenase; KEGG: sak:SAK_1211 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
  
 0.571
ADB46731.1
KEGG: bay:RBAM_036150 hypothetical protein.
 
   
 0.523
ADB46583.1
PFAM: transcriptional regulator PadR family protein; KEGG: lpj:JDM1_2932 regulator of phenolic acid metabolism PadR.
       0.509
ADB48311.1
KEGG: ypg:YpAngola_A0185 hypothetical protein.
 
     0.481
ADB46987.1
KEGG: gur:Gura_3176 hypothetical protein.
 
 
   0.453
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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