Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB46598.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
ADB46599.1
PFAM: nitroreductase; KEGG: shi:Shel_04910 methylase involved in ubiquinone/menaquinone biosynthesis.
       0.735
ADB46600.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cbk:CLL_A3210 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA.
       0.646
ADB46601.1
Hypothetical protein.
       0.646
ADB46597.1
Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bha:BH0578 GntR family transcriptional regulator.
       0.535
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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