STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB46608.1PFAM: Polypeptide-transport-associated domain protein ShlB-type; surface antigen (D15); KEGG: gsu:GSU1153 OMP85 family outer membrane protein. (556 aa)    
Predicted Functional Partners:
ADB46609.1
TIGRFAM: adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; KEGG: dol:Dole_0612 hemolysin-type calcium-binding region.
 
     0.935
ADB47098.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: avn:Avin_37880 hypothetical protein.
  
  
 
0.660
ADB47099.1
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: cch:Cag_1053 filamentous haemagglutinin-like.
 
 
 0.621
ADB48132.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: rme:Rmet_5340 TonB box-like protein.
  
  
 
0.575
ADB46610.1
Hypothetical protein.
       0.531
ADB48027.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.494
ADB46607.1
Hypothetical protein; KEGG: azc:AZC_3961 outer membrane protein Omp31 precursor.
  
    0.444
ADB48031.1
PFAM: permease YjgP/YjgQ family protein; KEGG: gvi:gvip124 hypothetical protein.
  
     0.404
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.