Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB46609.1TIGRFAM: adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; KEGG: dol:Dole_0612 hemolysin-type calcium-binding region. (5904 aa)    
Predicted Functional Partners:
ADB46608.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; surface antigen (D15); KEGG: gsu:GSU1153 OMP85 family outer membrane protein.
 
     0.935
ADB46610.1
Hypothetical protein.
       0.548
ADB47364.1
PFAM: sulfatase; KEGG: cha:CHAB381_1777 sulfatase domain-containing protein.
  
     0.502
ADB48251.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pmr:PMI3246 vitamin B12/cobalamin outer membrane transporter.
  
 
   0.482
ADB47389.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; KEGG: cac:CAC1812 sporulation protein SpoIIIE, DNA segregation ATPase.
   
 
 0.470
ADB46607.1
Hypothetical protein; KEGG: azc:AZC_3961 outer membrane protein Omp31 precursor.
   
 
 0.460
ADB46525.1
Sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: cba:CLB_1645 aco operon transcriptional regulator.
  
     0.442
ADB47265.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: lpp:lpp0335 hypothetical protein.
 
   
 0.441
ADB46791.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: efe:EFER_2240 colicin I receptor.
    
 
 0.419
ADB48400.1
PFAM: Domain of unknown function DUF1850; KEGG: amt:Amet_0780 hypothetical protein.
  
     0.411
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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