Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ADB46627.1PFAM: AzlC family protein; KEGG: sfu:Sfum_0194 AzlC family protein. (258 aa)    
Predicted Functional Partners:
ADB46626.1
PFAM: branched-chain amino acid transport; KEGG: dps:DP2464 hypothetical protein.
 
  
 0.958
ADB48209.1
PFAM: branched-chain amino acid transport; KEGG: bsu:BSU26700 branched-chain amino acid transporter.
 
  
 0.538
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.506
ADB46628.1
PFAM: conserved hypothetical protein; KEGG: kol:Kole_1784 hypothetical protein.
       0.505
ADB46630.1
TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: fnu:FN1801 sodium/glutamate symport carrier protein.
       0.490
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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