Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB46640.1PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein. (404 aa)    
Predicted Functional Partners:
ADB46639.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_1763 ABC transporter related protein.
 
 0.999
ADB46638.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppd:Ppro_3233 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.998
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.920
ADB48231.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gau:GAU_2113 putative ABC transporter ATP- binding protein.
     0.907
ADB48056.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component.
 
     0.881
ADB47045.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dhd:Dhaf_4750 ABC transporter related.
 
 
    0.862
ADB47165.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjr:CJE1000 amino acid ABC transporter, ATP- binding protein PEB1.
 
 
    0.856
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
      0.824
ADB46678.1
PFAM: secretion protein HlyD family protein; KEGG: bbr:BB2383 HlyD family secretion protein.
 
  
 0.816
metN-2
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
      0.790
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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