Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADB46652.1TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dma:DMR_04350 efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (383 aa)    
Predicted Functional Partners:
ADB46653.1
TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: dsa:Desal_3289 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.999
ADB48054.1
PFAM: outer membrane efflux protein; KEGG: dde:Dde_0961 outer membrane protein-like.
 
 0.988
ADB46677.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: dat:HRM2_48490 outer membrane protein.
 
 
 0.888
ADB46640.1
PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein.
 
 
 0.748
ADB46639.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_1763 ABC transporter related protein.
 
 
 0.623
ADB46791.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: efe:EFER_2240 colicin I receptor.
  
   
 0.623
ADB46678.1
PFAM: secretion protein HlyD family protein; KEGG: bbr:BB2383 HlyD family secretion protein.
 
   
 0.566
ADB46758.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cpc:Cpar_1184 TonB-dependent receptor.
  
     0.561
ADB46654.1
PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0638 ABC transporter.
 
     0.548
ADB46651.1
KEGG: bbe:BBR47_47820 hypothetical protein.
       0.516
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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