Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB46685.1PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bfs:BF0621 putative ErfK/YbiS/YcfS/YnhG family protein. (205 aa)    
Predicted Functional Partners:
ADB46684.1
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: shi:Shel_22480 hypothetical protein.
 
    0.738
ADB46683.1
KEGG: sto:ST1078 hypothetical protein.
 
     0.686
ADB46686.1
PFAM: GCN5-related N-acetyltransferase; KEGG: aac:Aaci_2326 GCN5-related N- acetyltransferase.
  
    0.638
ADB46450.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: chy:CHY_0038 hypothetical protein.
  
     0.601
ADB48014.1
KEGG: hor:Hore_17440 hypothetical protein.
  
     0.570
ADB48026.1
PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein).
  
    0.545
ADB48025.1
PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein).
  
    0.539
ADB48024.1
PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein).
  
    0.531
ADB48179.1
KEGG: geo:Geob_3477 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
     
 0.521
ADB48023.1
PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein).
  
    0.512
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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