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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB46686.1PFAM: GCN5-related N-acetyltransferase; KEGG: aac:Aaci_2326 GCN5-related N- acetyltransferase. (96 aa)    
Predicted Functional Partners:
ADB46685.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bfs:BF0621 putative ErfK/YbiS/YcfS/YnhG family protein.
  
    0.639
ADB46684.1
PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: shi:Shel_22480 hypothetical protein.
       0.571
ADB46683.1
KEGG: sto:ST1078 hypothetical protein.
       0.530
ADB46924.1
PFAM: iron-containing alcohol dehydrogenase; KEGG: fma:FMG_1265 NADH-dependent butanol dehydrogenase.
   
    0.422
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.