Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADB46737.1PFAM: protein of unknown function DUF1486; KEGG: ccv:CCV52592_0353 putative pyruvate kinase. (151 aa)    
Predicted Functional Partners:
ADB48384.1
PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: apl:APL_0104 autotransporter adhesin.
  
     0.664
ADB47516.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: pmu:PM0714 Hsf.
  
     0.612
ADB46444.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Gp5 domain protein; KEGG: sep:SE2249 streptococcal hemagglutinin protein.
 
     0.604
ADB46901.1
PFAM: sulfatase; KEGG: hhe:HH1674 hypothetical protein.
  
     0.561
ADB47363.1
PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_3990 GDSL family lipase.
  
     0.531
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.525
ADB46731.1
KEGG: bay:RBAM_036150 hypothetical protein.
  
     0.520
ADB47099.1
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: cch:Cag_1053 filamentous haemagglutinin-like.
  
     0.519
ADB47098.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: avn:Avin_37880 hypothetical protein.
  
     0.511
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
  0.500
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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