STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB46780.1PFAM: BioY protein; KEGG: cdf:CD2971 putative biotin synthase. (192 aa)    
Predicted Functional Partners:
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 0.879
ADB48390.1
PFAM: cobalt transport protein; KEGG: pth:PTH_1659 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 0.876
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.865
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 0.861
ADB48392.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tsi:TSIB_1505 putative ABC transporter ATP- binding protein.
   
 0.843
ADB46781.1
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cdf:CD2970 putative thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.786
ADB46782.1
PFAM: AMP-dependent synthetase and ligase; KEGG: cdf:CD2969 putative AMP-binding protein.
  
    0.738
ADB46707.1
PFAM: BioY protein; KEGG: dae:Dtox_4332 BioY protein.
  
     0.696
ADB46465.1
PFAM: BioY protein; KEGG: dae:Dtox_4332 BioY protein.
  
     0.619
ADB46783.1
KEGG: mac:MA2541 hypothetical protein.
       0.497
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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