Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADB46784.1KEGG: app:CAP2UW1_1314 hypothetical protein. (213 aa)    
Predicted Functional Partners:
ADB46785.1
PFAM: protein of unknown function UPF0066; KEGG: amu:Amuc_0110 protein of unknown function UPF0066.
 
     0.817
ADB46786.1
PFAM: Haemagluttinin domain protein; Hep_Hag repeat- containing protein; YadA domain protein; S-layer domain protein; KEGG: pmu:PM0714 Hsf.
 
     0.763
ADB48215.1
KEGG: cpi:Cpin_2966 hypothetical protein.
  
    0.676
ADB46836.1
KEGG: sca:Sca_2326 hypothetical protein.
  
     0.664
ADB48251.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pmr:PMI3246 vitamin B12/cobalamin outer membrane transporter.
  
     0.624
ADB48050.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hypothetical protein.
  
     0.613
ADB47910.1
KEGG: cth:Cthe_1459 hypothetical protein.
  
    0.605
ADB46416.1
PFAM: protein of unknown function DUF721; KEGG: cef:CE0005 hypothetical protein.
  
     0.570
ADB48313.1
PFAM: adenylate cyclase; KEGG: pfl:PFL_5943 hypothetical protein.
  
     0.554
ADB46783.1
KEGG: mac:MA2541 hypothetical protein.
 
     0.548
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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