Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB46797.1PFAM: protein of unknown function DUF805; KEGG: mag:amb4251 hypothetical protein. (156 aa)    
Predicted Functional Partners:
ADB48050.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: hypothetical protein.
  
     0.730
ADB48215.1
KEGG: cpi:Cpin_2966 hypothetical protein.
  
     0.704
ADB48013.1
Hypothetical protein.
  
     0.661
ADB46416.1
PFAM: protein of unknown function DUF721; KEGG: cef:CE0005 hypothetical protein.
  
     0.643
ADB47694.1
KEGG: ctc:CTC00686 ATP-dependent nuclease subunit B.
  
     0.640
ADB46786.1
PFAM: Haemagluttinin domain protein; Hep_Hag repeat- containing protein; YadA domain protein; S-layer domain protein; KEGG: pmu:PM0714 Hsf.
  
     0.637
ADB48053.1
PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein.
  
     0.633
ADB46836.1
KEGG: sca:Sca_2326 hypothetical protein.
  
     0.625
ADB46683.1
KEGG: sto:ST1078 hypothetical protein.
  
     0.601
ADB47622.1
KEGG: dvl:Dvul_2938 hypothetical protein.
  
     0.565
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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