Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADB46802.1PFAM: O-antigen polymerase; KEGG: dae:Dtox_4116 O-antigen polymerase. (423 aa)    
Predicted Functional Partners:
ADB46801.1
TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: drm:Dred_2552 FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
       0.783
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.730
ADB48053.1
PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein.
  
     0.728
ADB48034.1
PFAM: protein of unknown function DUF1239; KEGG: cyh:Cyan8802_4032 protein of unknown function DUF1239.
  
   
 0.722
ADB47118.1
KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: sugar transferase.
  
  
 0.705
ADB48033.1
PFAM: OstA family protein; KEGG: lba:Lebu_2045 OstA family protein.
 
     0.689
ADB47827.1
S-adenosylmethionine decarboxylase related protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
  
     0.675
ADB48013.1
Hypothetical protein.
  
   
 0.668
ADB48026.1
PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein).
  
     0.660
ADB48023.1
PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein).
  
     0.658
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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