Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
citGKEGG: asu:Asuc_1198 holo-ACP synthase, triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: holo-ACP synthase CitX; PFAM: triphosphoribosyl-dephospho-CoA protein; Apo- citrate lyase phosphoribosyl-dephospho-CoA transferase. (462 aa)    
Predicted Functional Partners:
ADB46811.1
KEGG: sub:SUB1586 citrate lyase alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit.
 
  
 0.998
ADB46812.1
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: fnu:FN1379 citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.998
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.998
ADB46713.1
Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
 0.990
ADB46814.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator.
       0.768
ADB47722.1
PFAM: pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: tex:Teth514_1582 oxaloacetate decarboxylase.
     
 0.535
ADB47465.1
KEGG: hmo:HM1_2933 hypothetical protein.
   
    0.495
ADB47502.1
KEGG: bca:BCE_0374 rRNA biogenesis protein rrp5, putative.
   
    0.495
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
   
    0.495
ADB48411.1
PFAM: dihydrodipicolinate synthetase; KEGG: mta:Moth_0631 dihydrodipicolinate synthetase; Belongs to the DapA family.
   
    0.495
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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