Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADB46928.1PFAM: aldo/keto reductase; KEGG: lac:LBA0558 aldehyde reductase. (282 aa)    
Predicted Functional Partners:
ADB46927.1
PFAM: aldo/keto reductase; KEGG: ere:EUBREC_3461 oxidoreductase, aldo/keto reductase family.
 
    
0.726
ADB47925.1
KEGG: lba:Lebu_1430 hypothetical protein.
    0.566
ADB46930.1
KEGG: lba:Lebu_1430 hypothetical protein.
    0.549
ADB46935.1
Flavodoxin; KEGG: bvu:BVU_3085 flavodoxin.
     0.454
ADB46926.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: lba:Lebu_1438 transcriptional regulator, LysR family.
       0.453
ADB47334.1
Hypothetical protein.
  
 
 0.417
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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