Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB46929.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: msu:MS2158 hypothetical protein. (139 aa)    
Predicted Functional Partners:
ADB46937.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: bfs:BF2138 carboxymuconolactone decarboxylase.
   
 0.969
ADB46930.1
KEGG: lba:Lebu_1430 hypothetical protein.
 
    0.835
ADB46931.1
Flavodoxin; KEGG: dth:DICTH_0011 flavodoxin.
 
     0.604
ADB47932.1
PFAM: acyl-CoA dehydrogenase domain protein; Electron transfer flavoprotein alpha subunit; Rubredoxin- type Fe(Cys)4 protein; KEGG: cbi:CLJ_B3073 acyl-CoA dehydrogenase family protein/electron transfer protein.
  
  
 0.528
ADB46935.1
Flavodoxin; KEGG: bvu:BVU_3085 flavodoxin.
 
     0.493
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
    0.441
ADB48336.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: amt:Amet_0763 helix-turn-helix domain- containing protein.
  
 
 0.427
ADB46454.1
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: bhy:BHWA1_00426 adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.420
ADB47925.1
KEGG: lba:Lebu_1430 hypothetical protein.
 
    0.406
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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