Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB46943.1Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (457 aa)    
Predicted Functional Partners:
ADB46942.1
Conserved hypothetical protein; Displays ATPase and GTPase activities.
  
  
 0.960
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
  
 0.910
ADB46945.1
PFAM: polysaccharide deacetylase; KEGG: chy:CHY_0274 polysaccharide deacetylase family protein.
       0.786
ADB46941.1
TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: dae:Dtox_3945 Cof-like hydrolase.
 
     0.692
ADB46552.1
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: chy:CHY_2591 putative transcriptional regulator.
  
     0.603
ADB46946.1
KEGG: drm:Dred_3299 hypothetical protein.
       0.566
ADB46694.1
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: sth:STH1883 LytR family transcriptional regulator.
  
     0.555
ADB48027.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.432
ADB46947.1
PFAM: Radical SAM domain protein; KEGG: aoe:Clos_1718 radical SAM domain-containing protein.
       0.417
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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