Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADB46947.1PFAM: Radical SAM domain protein; KEGG: aoe:Clos_1718 radical SAM domain-containing protein. (468 aa)    
Predicted Functional Partners:
ADB46946.1
KEGG: drm:Dred_3299 hypothetical protein.
 
 
   0.982
ADB46577.1
PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: amt:Amet_0163 polysaccharide biosynthesis protein.
  
     0.494
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
 
     0.488
ADB46943.1
Protein of unknown function UPF0052 and CofD; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
       0.417
ADB46945.1
PFAM: polysaccharide deacetylase; KEGG: chy:CHY_0274 polysaccharide deacetylase family protein.
  
    0.410
ADB47201.1
PFAM: protein of unknown function DUF633; KEGG: sth:STH597 hypothetical protein.
  
     0.408
ADB46942.1
Conserved hypothetical protein; Displays ATPase and GTPase activities.
       0.407
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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