Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB46960.1PFAM: cation transporter; KEGG: eel:EUBELI_01578 trk system potassium uptake protein TrkH. (480 aa)    
Predicted Functional Partners:
ADB46959.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: ere:EUBREC_2802 potassium transporter peripheral membrane component.
 
 
 0.981
ADB47856.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cno:NT01CX_1765 trk system potassium uptake protein TrkA.
  
 
 0.652
ADB46961.1
Protein-tyrosine-phosphatase; PFAM: PHP domain protein; KEGG: eat:EAT1b_1202 protein-tyrosine-phosphatase.
       0.623
ADB46958.1
HymD protein; KEGG: cpo:COPRO5265_0171 HymD protein.
       0.467
ADB46892.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cby:CLM_3126 pyruvate ferredoxin oxidoreductase.
   
   0.423
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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