Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADB47005.1PFAM: GCN5-related N-acetyltransferase; KEGG: blj:BLD_0148 acetyltransferase. (245 aa)    
Predicted Functional Partners:
ADB47006.1
PFAM: protein of unknown function DUF1063; KEGG: dhd:Dhaf_2196 protein of unknown function DUF1063; Belongs to the UPF0597 family.
 
     0.755
ADB47268.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eel:EUBELI_20433 ATP-binding cassette, subfamily C, bacterial.
 
     0.709
ADB47004.1
Hypothetical protein.
       0.431
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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