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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB47023.1PFAM: protein of unknown function DUF453; KEGG: bay:RBAM_031870 YraM. (380 aa)    
Predicted Functional Partners:
ADB47025.1
PFAM: aconitate hydratase domain protein; KEGG: kpe:KPK_4725 hypothetical protein.
  
  
 0.786
ADB47024.1
PFAM: Dicarboxylate carrier MatC domain protein; Citrate transporter; KEGG: aoe:Clos_0814 dicarboxylate carrier MatC domain-containing protein.
 
    0.745
ADB48326.1
PFAM: amidohydrolase 2; KEGG: mno:Mnod_8318 amidohydrolase 2.
 
   
 0.598
ADB48378.1
PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; NADP oxidoreductase coenzyme F420- dependent; KEGG: bcl:ABC3757 hypothetical protein.
 
    0.585
ADB48376.1
PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpc:RPC_2726 dimethylmenaquinone methyltransferase.
 
   
 0.579
ADB46505.1
PFAM: aconitate hydratase domain protein; KEGG: hor:Hore_21050 aconitate hydratase.
  
  
 0.434
ADB48322.1
TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: mta:Moth_1882 aconitate hydratase.
  
  
 0.434
ADB48324.1
PFAM: aconitate hydratase domain protein; KEGG: ecl:EcolC_2891 aconitate hydratase domain- containing protein.
  
  
 0.434
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.