STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB47126.1KEGG: bcy:Bcer98_3736 putative transposase. (122 aa)    
Predicted Functional Partners:
ADB47125.1
KEGG: cbe:Cbei_1670 hypothetical protein.
 
     0.912
ADB48021.1
PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase.
  
     0.755
ADB46555.1
PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase.
  
     0.754
ADB47131.1
PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase.
  
     0.754
ADB47419.1
PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase.
  
     0.753
ADB47522.1
PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase.
  
     0.753
ADB47727.1
PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase.
  
     0.753
ADB48365.1
PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase.
  
     0.753
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.