Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47154.1PFAM: NADPH-dependent FMN reductase; KEGG: eel:EUBELI_00462 hypothetical protein. (193 aa)    
Predicted Functional Partners:
ADB47335.1
PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_0784 NADPH-dependent FMN reductase.
 
     0.678
ADB47152.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cdf:CD2822 putative peptidase.
  
    0.541
ADB47153.1
Hypothetical protein.
       0.533
ADB47151.1
KEGG: eat:EAT1b_1148 hypothetical protein.
       0.501
ADB47169.1
PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbe:Cbei_3948 nitroreductase.
 
  
 0.490
ADB47264.1
PFAM: NADPH-dependent FMN reductase; KEGG: bhy:BHWA1_00383 hypothetical protein.
  
     0.463
prfC
Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.
  
  
 0.411
ADB46931.1
Flavodoxin; KEGG: dth:DICTH_0011 flavodoxin.
 
     0.401
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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