STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB47167.1TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cju:C8J_0857 amino acid ABC transporter permease. (231 aa)    
Predicted Functional Partners:
ADB47165.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjr:CJE1000 amino acid ABC transporter, ATP- binding protein PEB1.
 
 0.994
ADB47166.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: cbe:Cbei_4172 extracellular solute-binding protein.
 
 0.985
ADB47043.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: dau:Daud_1135 extracellular solute-binding protein.
 
 0.981
ADB47816.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: mta:Moth_1126 extracellular solute-binding protein.
 
 0.981
ADB47168.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4170 polar amino acid ABC transporter, inner membrane subunit.
 
  
 
0.980
ADB47042.1
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: drm:Dred_0727 extracellular solute-binding protein.
 
 0.965
ADB47045.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dhd:Dhaf_4750 ABC transporter related.
 
 
 0.916
ADB47044.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_0505 glutamine ABC transporter, permease protein.
  
  
 
0.496
ADB47169.1
PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbe:Cbei_3948 nitroreductase.
   
   0.440
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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