Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47230.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
ADB47231.1
PFAM: protein of unknown function DUF322; KEGG: tpd:Teth39_1096 hypothetical protein.
       0.447
ADB47232.1
KEGG: sth:STH1851 hypothetical protein.
       0.447
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
   
   0.434
ADB47233.1
PFAM: Protein of unknown function DUF2273; KEGG: cce:Ccel_1906 hypothetical protein.
       0.429
nusB
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.404
ADB47235.1
PFAM: peptidase M22 glycoprotease; KEGG: bbe:BBR47_23360 peptidase M22 family protein.
       0.404
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.404
ADB47238.1
PFAM: Polyprenyl synthetase; KEGG: dae:Dtox_2586 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.404
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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