Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADB47255.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: ccu:Ccur_09790 cupin domain-containing protein. (216 aa)    
Predicted Functional Partners:
ADB47254.1
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_00467 NorM, Na+-driven multidrug efflux pump.
 
     0.533
ADB48403.1
KEGG: ldb:Ldb0217 hypothetical protein.
  
     0.461
ADB47894.1
KEGG: bvu:BVU_2290 hypothetical protein.
  
     0.431
ADB47862.1
KEGG: msu:MS2255 hypothetical protein.
  
    0.412
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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