Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47264.1PFAM: NADPH-dependent FMN reductase; KEGG: bhy:BHWA1_00383 hypothetical protein. (181 aa)    
Predicted Functional Partners:
ADB46936.1
KEGG: shi:Shel_17170 uncharacterized Fe-S center protein.
  
     0.560
ADB47265.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: lpp:lpp0335 hypothetical protein.
       0.528
ADB47266.1
Beta-lactamase class A-like protein; KEGG: aoe:Clos_0923 beta-lactamase.
       0.528
ADB47169.1
PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbe:Cbei_3948 nitroreductase.
 
  
 0.469
ADB47154.1
PFAM: NADPH-dependent FMN reductase; KEGG: eel:EUBELI_00462 hypothetical protein.
  
     0.463
ADB47188.1
PFAM: Domain of unknown function DUF1848; KEGG: mla:Mlab_0293 hypothetical protein.
  
     0.437
ADB48157.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cdf:CD0474 putative iron-sulfur protein.
 
     0.409
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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