Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mltGAminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (342 aa)    
Predicted Functional Partners:
ADB47285.1
PFAM: peptidase U32; KEGG: cce:Ccel_1474 peptidase U32.
  
    0.821
ADB47282.1
Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.791
ADB47283.1
PFAM: protein of unknown function DUF1292; KEGG: hmo:HM1_0534 hypothetical protein.
       0.785
ADB47281.1
PFAM: protein of unknown function DUF965; KEGG: hmo:HM1_0531 hypothetical protein.
       0.784
ADB48181.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
  
 0.595
ADB46989.1
Peptidoglycan glycosyltransferase; PFAM: glycosyl transferase family 51; KEGG: aae:aq_624 penicillin binding protein 1A.
  
   
 0.580
ADB47721.1
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: dau:Daud_1369 1A family penicillin-binding protein.
  
   
 0.571
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
  
 0.543
ADB46722.1
PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine- protein kinase, subgroup, catalytic domain; PASTA domain containing protein; KEGG: ate:Athe_1045 serine/threonine protein kinase with PASTA sensor(s).
  
  
 0.537
ADB47286.1
PFAM: peptidase M24; creatinase; KEGG: oih:OB1896 Xaa-Pro dipeptidase; Belongs to the peptidase M24B family.
       0.536
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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