Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47329.1PFAM: Antibiotic biosynthesis monooxygenase; KEGG: asu:Asuc_1533 antibiotic biosynthesis monooxygenase. (228 aa)    
Predicted Functional Partners:
ADB47327.1
KEGG: apj:APJL_0917 hypothetical protein.
 
     0.763
ADB47328.1
PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3695 major facilitator superfamily MFS_1.
 
     0.713
ADB47364.1
PFAM: sulfatase; KEGG: cha:CHAB381_1777 sulfatase domain-containing protein.
  
     0.643
ADB46778.1
KEGG: eca:ECA2246 hypothetical protein.
  
     0.550
ADB47077.1
KEGG: rca:Rcas_1163 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein.
  
   
 0.520
ADB47582.1
KEGG: mmr:Mmar10_2551 hypothetical protein.
  
     0.477
ADB47402.1
PFAM: peptidase A24A prepilin type IV; KEGG: pth:PTH_1144 type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
  
     0.465
ADB47073.1
PFAM: bifunctional deaminase-reductase domain protein; KEGG: dhd:Dhaf_3920 5-amino-6-(5- phosphoribosylamino)uracil reductase.
  
     0.432
ADB47412.1
KEGG: amt:Amet_2923 hypothetical protein.
  
     0.413
ADB47326.1
KEGG: bhy:BHWA1_02022 hydrolase of the alpha/beta superfamily.
 
     0.401
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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