Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47333.1PFAM: regulatory protein TetR; KEGG: cac:CA_P0127 TetR family transcriptional regulator. (206 aa)    
Predicted Functional Partners:
ADB47334.1
Hypothetical protein.
  
  
 0.754
ADB47335.1
PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_0784 NADPH-dependent FMN reductase.
       0.716
ADB47336.1
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: asu:Asuc_1533 antibiotic biosynthesis monooxygenase.
       0.677
ADB47338.1
PFAM: regulatory protein TetR; KEGG: shi:Shel_22630 transcriptional regulator.
  
     0.427
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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