Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47334.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
ADB47333.1
PFAM: regulatory protein TetR; KEGG: cac:CA_P0127 TetR family transcriptional regulator.
  
  
 0.754
ADB47335.1
PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_0784 NADPH-dependent FMN reductase.
  
  
 0.752
ADB47336.1
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: asu:Asuc_1533 antibiotic biosynthesis monooxygenase.
       0.704
ADB47515.1
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: shi:Shel_12070 permease, glycerol uptake facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.565
ADB46892.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cby:CLM_3126 pyruvate ferredoxin oxidoreductase.
  
  
 0.456
ADB46927.1
PFAM: aldo/keto reductase; KEGG: ere:EUBREC_3461 oxidoreductase, aldo/keto reductase family.
  
 
 0.417
ADB46928.1
PFAM: aldo/keto reductase; KEGG: lac:LBA0558 aldehyde reductase.
  
 
 0.417
ADB46980.1
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mmy:MSC_1062 AAA ATPase family protein.
    
 
 0.411
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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