Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47366.1KEGG: dhd:Dhaf_0640 ATP-dependent endonuclease of the OLD family-like protein. (552 aa)    
Predicted Functional Partners:
ADB47200.1
Hypothetical protein; KEGG: cco:CCC13826_0299 spore coat polysaccharide biosynthesis protein SpsC-like protein.
 
     0.777
ADB47768.1
Hypothetical protein; KEGG: cyn:Cyan7425_3973 KWG leptospira repeat protein.
  
     0.772
ADB46444.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Gp5 domain protein; KEGG: sep:SE2249 streptococcal hemagglutinin protein.
  
    0.767
ADB46574.1
PFAM: Haemagluttinin domain protein; YadA domain protein; KEGG: msu:MS0748 hypothetical protein.
  
    0.764
ADB47516.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: pmu:PM0714 Hsf.
  
     0.760
ADB46731.1
KEGG: bay:RBAM_036150 hypothetical protein.
  
     0.757
ADB48226.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: asu:Asuc_1158 YadA domain-containing protein.
  
     0.754
ADB48384.1
PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: apl:APL_0104 autotransporter adhesin.
  
     0.743
ADB46901.1
PFAM: sulfatase; KEGG: hhe:HH1674 hypothetical protein.
  
     0.706
ADB47686.1
PFAM: OmpA/MotB domain protein; porin opacity type; KEGG: vpa:VP0764 outer membrane protein OmpA.
  
     0.682
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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