STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB47397.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
ADB47398.1
KEGG: dda:Dd703_0812 hypothetical protein.
       0.718
ADB47396.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dae:Dtox_4086 PHP domain protein.
       0.515
ADB47394.1
Ribonuclease HIII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
       0.479
ADB47395.1
PFAM: protein of unknown function DUF322; KEGG: cth:Cthe_2070 hypothetical protein.
       0.479
ADB47399.1
PFAM: major facilitator superfamily MFS_1; KEGG: lmc:Lm4b_01258 antibiotic resistance protein.
       0.436
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.