Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB47405.1PFAM: YdjC family protein; KEGG: mag:amb3100 hypothetical protein. (283 aa)    
Predicted Functional Partners:
ADB47403.1
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; KEGG: cbt:CLH_2044 heat-responsive suppressor HrsA.
     
 0.731
ADB47404.1
TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: ere:EUBREC_0018 fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
       0.574
ADB47402.1
PFAM: peptidase A24A prepilin type IV; KEGG: pth:PTH_1144 type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
     0.499
ADB46573.1
PFAM: glycosyl transferase family 39; KEGG: geo:Geob_1553 glycosyl transferase family 39.
 
  
 0.455
ADB47406.1
Membrane protein-like protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
       0.440
ADB46704.1
PFAM: glycosyl transferase family 39; KEGG: ote:Oter_1409 glycosyl transferase family protein.
 
  
 0.437
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.