Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ADB47413.1PFAM: Uncharacterised conserved protein UCP037246; KEGG: ere:EUBREC_1717 hypothetical protein. (80 aa)    
Predicted Functional Partners:
ADB47412.1
KEGG: amt:Amet_2923 hypothetical protein.
 
     0.531
ADB47414.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: lbu:LBUL_1203 ABC-type multidrug transport system, ATPase and permease component.
       0.508
ADB47415.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cth:Cthe_0396 ABC transporter related protein.
       0.508
ADB47411.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: cdf:CD2829 hypothetical protein.
       0.437
ADB47410.1
PFAM: peptidase C1B bleomycin hydrolase; KEGG: lpj:JDM1_0540 cysteine aminopeptidase; Belongs to the peptidase C1 family.
 
     0.404
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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