Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47436.1PFAM: HI0933 family protein; KEGG: aac:Aaci_1630 FAD dependent oxidoreductase. (418 aa)    
Predicted Functional Partners:
ADB47932.1
PFAM: acyl-CoA dehydrogenase domain protein; Electron transfer flavoprotein alpha subunit; Rubredoxin- type Fe(Cys)4 protein; KEGG: cbi:CLJ_B3073 acyl-CoA dehydrogenase family protein/electron transfer protein.
  
 
 0.749
ADB47435.1
PFAM: sodium/sulphate symporter; KEGG: lcb:LCABL_04300 sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylate symporter).
       0.737
ADB46954.1
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: apr:Apre_1355 electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.612
ADB47357.1
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: tye:THEYE_A1636 electron transfer flavoprotein beta-subunit.
  
 
 0.612
ADB46892.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cby:CLM_3126 pyruvate ferredoxin oxidoreductase.
  
  
 0.586
ADB47437.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pth:PTH_1546 transcriptional regulator.
  
    0.538
ADB46955.1
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: cbl:CLK_2702 electron transfer flavoprotein, alpha subunit/FixB family protein.
  
 
 0.492
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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