Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47439.1TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter. (434 aa)    
Predicted Functional Partners:
ADB47438.1
PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_4241 alpha/beta hydrolase fold.
       0.752
ADB47440.1
PFAM: alpha/beta hydrolase fold; KEGG: ctc:CTC02183 putative arylesterase, non-heme chloride peroxidase.
       0.746
ADB47441.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC1046 LysR family transcriptional regulator.
  
    0.522
ADB47024.1
PFAM: Dicarboxylate carrier MatC domain protein; Citrate transporter; KEGG: aoe:Clos_0814 dicarboxylate carrier MatC domain-containing protein.
  
     0.414
ADB48320.1
PFAM: Dicarboxylate carrier MatC domain protein; KEGG: efe:EFER_3664 hypothetical protein; putative membrane protein.
  
     0.411
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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