Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADB47448.1KEGG: det:DET1091 virulence-related protein. (268 aa)    
Predicted Functional Partners:
ADB47447.1
KEGG: det:DET1090 hypothetical protein.
 
    0.953
ADB47451.1
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: det:DET1094 HNH endonuclease domain- containing protein.
 
    0.920
ADB47449.1
PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: hmo:HM1_2946 DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.915
ADB47450.1
KEGG: tex:Teth514_1242 hypothetical protein.
 
     0.904
ADB47444.1
KEGG: hmo:HM1_2958 phage terminase, large subunit, putative.
 
    0.868
ADB47459.1
KEGG: hmo:HM1_2897 hypothetical protein.
 
    0.802
ADB47517.1
PFAM: Resolvase domain; Recombinase; KEGG: spa:M6_Spy1125 site-specific recombinase.
 
   
 0.765
ADB47465.1
KEGG: hmo:HM1_2933 hypothetical protein.
  
     0.762
ADB47502.1
KEGG: bca:BCE_0374 rRNA biogenesis protein rrp5, putative.
  
     0.759
ADB47455.1
PFAM: VRR-NUC domain protein; KEGG: det:DET1097 hypothetical protein.
 
     0.758
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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