Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB47473.1PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cce:Ccel_1263 GntR domain protein. (231 aa)    
Predicted Functional Partners:
ADB47808.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: drm:Dred_0095 GntR family transcriptional regulator.
  
  
 0.707
ADB48359.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: amt:Amet_0553 GntR family transcriptional regulator.
  
  
 0.693
ADB47709.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: set:SEN3190 LysR-family transcriptional regulator.
  
  
 0.674
ADB47472.1
KEGG: oih:OB2839 hypothetical protein.
 
     0.671
ADB47470.1
PFAM: conserved hypothetical protein; KEGG: oih:OB2837 hypothetical protein.
 
    0.594
ADB47471.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: oih:OB2838 hypothetical protein.
  
    0.589
ADB46623.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: reu:Reut_B5545 regulatory protein, IclR.
 
  
 0.488
ADB48409.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: hor:Hore_04570 transcriptional regulator, LacI family.
  
 
 
 0.475
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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