Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADB47499.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
ADB47500.1
KEGG: hmo:HM1_2935 hypothetical protein.
       0.752
ADB47503.1
Hypothetical protein.
       0.725
ADB47501.1
KEGG: det:DET1102 hypothetical protein.
       0.721
ADB47502.1
KEGG: bca:BCE_0374 rRNA biogenesis protein rrp5, putative.
       0.721
ADB47498.1
PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; KEGG: det:DET1100 family A DNA-dependent DNA polymerase.
       0.594
ADB47504.1
PFAM: Sigma-70 region 4 type 2; KEGG: hmo:HM1_2931 hypothetical protein.
       0.465
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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