Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADB47547.1PFAM: Type II secretion system F domain; KEGG: drm:Dred_2117 type II secretion system protein. (321 aa)    
Predicted Functional Partners:
ADB47548.1
PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nth:Nther_2317 response regulator receiver protein.
 
 
 0.996
ADB47551.1
TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: nmu:Nmul_A2361 Flp pilus assembly CpaB.
 
 
 0.994
ADB47544.1
PFAM: type II secretion system protein E; KEGG: tro:trd_1011 CpaF.
 
 
 0.992
ADB47549.1
KEGG: nth:Nther_2317 response regulator receiver protein.
 
 
 0.990
ADB47550.1
PFAM: type II and III secretion system protein; transport-associated; KEGG: bte:BTH_I2542 type II/III secretion system protein; Belongs to the bacterial secretin family.
 
 
 0.990
ADB47543.1
PFAM: Type II secretion system F domain; KEGG: drm:Dred_2118 type II secretion system protein.
 
  
 
0.955
ADB47545.1
PFAM: TadE family protein; KEGG: pca:Pcar_1749 Flp pilus assembly protein TadG.
 
  
 0.858
ADB47542.1
PFAM: protein of unknown function DUF192; KEGG: rba:RB13078 hypothetical protein.
 
     0.840
ADB47546.1
Hypothetical protein.
       0.548
ADB47401.1
Hypothetical protein; KEGG: bpd:BURPS668_1882 TadE family protein.
  
  
 0.496
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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