Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
ADB47623.1PFAM: OmpA/MotB domain protein; KEGG: dvl:Dvul_2937 OmpA/MotB domain-containing protein. (235 aa)    
Predicted Functional Partners:
ADB47624.1
Hypothetical protein; KEGG: pap:PSPA7_6042 methyl-accepting chemotaxis protein.
 
 
 0.942
ADB47622.1
KEGG: dvl:Dvul_2938 hypothetical protein.
 
     0.877
ADB47621.1
PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dvl:Dvul_2939 SNF2-related protein.
 
     0.855
ADB47577.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: rxy:Rxyl_1667 ECF subfamily RNA polymerase sigma-24 factor.
  
  
 0.761
ADB47055.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_0565 multi-sensor hybrid histidine kinase.
  
 
 0.730
ADB46731.1
KEGG: bay:RBAM_036150 hypothetical protein.
 
 
 0.652
ADB46444.1
PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Gp5 domain protein; KEGG: sep:SE2249 streptococcal hemagglutinin protein.
 
  
 0.605
ADB47800.1
Diguanylate cyclase; KEGG: cdf:CD0522 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
 
    0.537
ADB48055.1
PFAM: Mammalian cell entry related domain protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
   
   0.530
ADB47453.1
KEGG: det:DET1095 hypothetical protein.
  
  
 0.510
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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