Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADB47705.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: aoe:Clos_0855 hypothetical protein. (293 aa)    
Predicted Functional Partners:
ADB47706.1
KEGG: stm:STM3354 L(+)-tartrate dehydratase subunit beta; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region.
  
    0.556
ADB47707.1
KEGG: set:SEN3188 tartrate dehydratase subunit alpha; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region.
       0.550
ADB47704.1
KEGG: rsa:RSal33209_1872 hypothetical protein.
       0.536
ADB47703.1
PFAM: Radical SAM domain protein; KEGG: cce:Ccel_0110 radical SAM domain protein.
       0.434
ADB47708.1
PFAM: Citrate transporter; KEGG: kpu:KP1_4956 putative cation transporter.
       0.433
Your Current Organism:
Acidaminococcus fermentans
NCBI taxonomy Id: 591001
Other names: A. fermentans DSM 20731, Acidaminococcus fermentans DSM 20731, Acidaminococcus fermentans str. DSM 20731, Acidaminococcus fermentans strain DSM 20731
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